Insertion junction: CLIP2.071139_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.071139
Chromosome:chromosome 3
Location:389299
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g144747 (1 of 1) PTHR10641//PTHR10641:SF518 - MYB-LIKE DNA-BINDING PROTEIN MYB // MYB DOMAIN PROTEIN 100-RELATED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATGCCACCAAGCCACGGCACCCTCAACGCTTGCGAAAGAGGAGAGAGAG
Internal bar code:GTGACACCTGGTCGCAAGGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2172
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:CTGAGGAATGCGCACGATTG
Suggested primer 2:ACGGTTTGTGCGATTTGTCG