Insertion junction: CLIP2.071141_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.071141
Chromosome:chromosome 15
Location:1193596
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre15.g639050 (1 of 12) IPR000104//IPR002893 - Antifreeze protein, type I // Zinc finger, MYND-type outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGTTATGGTTGAGGCAGGGACGGTATCTAATCGTCGTCGAGCCTCTTCA
Internal bar code:GTTGACTTGGCCCTTTCTACCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1810
LEAP-Seq percent confirming:90.7895
LEAP-Seq n confirming:69
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:76

Suggested primers for confirmation by PCR

Suggested primer 1:GCGTGTGCGTGTTGTAAGTT
Suggested primer 2:GGCATCTCCAGGAACACACA