Insertion junction: CLIP2.071146_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.071146
Chromosome:chromosome 4
Location:3095151
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g225650 (1 of 1) PF00031 - Cystatin domain (Cystatin) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATGACGCTCAGGGACACTCACGTCCATCAAATGGCTCCTTACATCAACG
Internal bar code:GAGAACTGGTTTTTTCTAGACT

Confirmation - LEAP-Seq

LEAP-Seq distance:725
LEAP-Seq percent confirming:90.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:AGAAAGCCGAACCGCAAGTA
Suggested primer 2:GGATGGTAAGGTACTCGCCG