Insertion junction: CLIP2.071148_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.071148
Chromosome:chromosome 12
Location:2277229
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g508350 TPR2,TPR11 (1 of 26) IPR013026//IPR019734 - Tetratricopeptide repeat-containing domain // Tetratricopeptide repeat; Tetratricopeptide-repeat protein 11 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCAAGGGGGTGAGGGGGTGAGGGTTATGGGGTTGGGAGGGAGGGTGGCG
Internal bar code:TGTAGCAGCTAGATACAATAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:3232
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:42
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:TCCTGGTCGCTTTGCATCTT
Suggested primer 2:TGGTAGGCTTGAACCGACAC