Insertion junction: CLIP2.071148_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.071148
Chromosome:chromosome 12
Location:2277255
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g508350 TPR2,TPR11 (1 of 26) IPR013026//IPR019734 - Tetratricopeptide repeat-containing domain // Tetratricopeptide repeat; Tetratricopeptide-repeat protein 11 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTGCCACCCCCTGCGCAGGCAGTGCACTCGCGCCAGACTGGCCATGTAG
Internal bar code:GCAGTCGGGATTCCTTAAGCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1818
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:70
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:70

Suggested primers for confirmation by PCR

Suggested primer 1:TGGTAGGCTTGAACCGACAC
Suggested primer 2:TCCTGGTCGCTTTGCATCTT