Insertion junction: CLIP2.071152_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.071152
Chromosome:chromosome 16
Location:4843540
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g687301 SRH26 (1 of 1) K15192 - TATA-binding protein-associated factor [EC:3.6.4.-] (BTAF1, MOT1); SNF2-related DNA/RNA helicase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCCACACGTCACACGCAACAGCCATGCCCCTGGGTCAGCAATGCCGACA
Internal bar code:TATTGCCTATTTGTTAGGATTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1065
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:42
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:CGAGATGTGGGATGAGAGCC
Suggested primer 2:CACACACACACACACACACC