Insertion junction: CLIP2.071154_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.071154
Chromosome:chromosome 2
Location:3755922
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g100750 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCAGAAATAACTGGAGACAGATTTACCAAGTAAAAGTTCCATGAGGCAA
Internal bar code:GCGTGTACAGGGATGGGAACTC

Confirmation - LEAP-Seq

LEAP-Seq distance:233
LEAP-Seq percent confirming:93.75
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:CGCCCCGATACAGCAATTTG
Suggested primer 2:TGACACCCGAGACCTTTGTG