Insertion junction: CLIP2.071157_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.071157
Chromosome:chromosome 16
Location:2747217
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g662100 (1 of 10) IPR004087//IPR004088 - K Homology domain // K Homology domain, type 1 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGAGCGCATTACCGCGTAGTGGCCAAGGCTCGACAGCTCGAGCCAGCATT
Internal bar code:GGACCAGAAGTGGCTTGAGCCC

Confirmation - LEAP-Seq

LEAP-Seq distance:1369
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:CCCCTCCCCCACATACCTAA
Suggested primer 2:TGGCGCTTGATGTTTTGGTG