Insertion junction: CLIP2.071160_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.071160
Chromosome:chromosome 3
Location:5780002
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g187650 (1 of 5) PF04884 - Vitamin B6 photo-protection and homoeostasis (DUF647) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCCAATAGGTCTCCAGTTGAGGGACGTGGTGTGTGCGGCTGGTCGGCGG
Internal bar code:AGAAAACGAATCAGCTGTCGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1341
LEAP-Seq percent confirming:57.4468
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:20
LEAP-Seq n unique pos:47

Suggested primers for confirmation by PCR

Suggested primer 1:TTTGTTGCGCTGCTTTACCC
Suggested primer 2:GTTAGTGGGCAGGAGTGGAG