Insertion junction: CLIP2.071170_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.071170
Chromosome:chromosome 2
Location:7235446
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g390986 TSD1 (1 of 1) PTHR22594//PTHR22594:SF5 - ASPARTYL/LYSYL-TRNA SYNTHETASE // ASPARTATE--TRNA LIGASE, MITOCHONDRIAL; Putative organellar aspartyl-tRNA synthetase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGTGATGGCGGAAATGATGAAACAGTGGGAGATTGGCTCAGGAATTCGTT
Internal bar code:TTCGCTTTTGGTAGGTCTCAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1273
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:TGAGACCTTGTGAGCACGTC
Suggested primer 2:CTGCCGAAGTTCCCTGGATT