Insertion junction: CLIP2.071171_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.071171
Chromosome:chromosome 10
Location:4091431
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g448250 (1 of 33) PF13855 - Leucine rich repeat (LRR_8) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTAAGCAATCTTGATCTGGATGGGCTGGCTGCAATTCGAAGGGTGGAGTA
Internal bar code:ACATGTTCGTTTAGACACGTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1433
LEAP-Seq percent confirming:97.4359
LEAP-Seq n confirming:38
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:CGTCAACAACAACCCCGAAC
Suggested primer 2:CGATGCAGTCATCTTGCAGC