Insertion junction: CLIP2.071175_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.071175
Chromosome:chromosome 12
Location:2570012
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g506700 SMM41 (1 of 14) PF10294 - Lysine methyltransferase (Methyltransf_16); S-adenosyl-L-methionine-dependent methyltransferase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCTGTGCCGTCATCCTGAGGCTCATCAGCGATTATGCCGGCATTTGGAA
Internal bar code:AAGCTGTATTCTCTCTATTATT

Confirmation - LEAP-Seq

LEAP-Seq distance:130
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:ACTCCAAGCTGTTCATCCGG
Suggested primer 2:GGTCACCTGTGCATGTCAGA