Insertion junction: CLIP2.071176_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.071176
Chromosome:chromosome 17
Location:571564
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g699650 DIV137 (1 of 3) IPR001441 - Decaprenyl diphosphate synthase-like; Hypothetical protein 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTGAAGTTTAACGCCCGCCCATATGTGTGCAATGTCATGCATTTGATGT
Internal bar code:AAAGTTAGAAAATGACTAGTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1472
LEAP-Seq percent confirming:97.2973
LEAP-Seq n confirming:36
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:37

Suggested primers for confirmation by PCR

Suggested primer 1:CTTTGGGAGCTAGGTTGGGG
Suggested primer 2:GAGCGGTCTCAAGTGTCGAA