Insertion junction: CLIP2.071187_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.071187
Chromosome:chromosome 3
Location:5074516
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre03.g180100 UNG2 Uracil DNA glycosylase; (1 of 1) 3.2.2.29 - Thymine-DNA glycosylase / Uracil/thymine DNA glycosylase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGGCAAAGGCTGGGGGAGGCAGCCGAAGCAAAACGGCCAAATCCGACTC
Internal bar code:CAAATGCTTCATATGCGAACCG

Confirmation - LEAP-Seq

LEAP-Seq distance:76
LEAP-Seq percent confirming:37.5
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:CCCTCAAACACCTCGCTCTT
Suggested primer 2:ACCAAAATGGCGGAGGGTAG