Insertion junction: CLIP2.071189_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.071189
Chromosome:chromosome 17
Location:736115
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g701000 (1 of 1) PTHR35518//PTHR35518:SF2 - FAMILY NOT NAMED // MAINTENANCE OF TELOMERE CAPPING PROTEIN 6 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTCGTTCCAGTGTTTATGGGTTCGTTCGGTATCCCGTGCCGTGCGGTTT
Internal bar code:ATCCGCGCGGGATGGTAGCAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1932
LEAP-Seq percent confirming:94.8276
LEAP-Seq n confirming:55
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:58

Suggested primers for confirmation by PCR

Suggested primer 1:CAGTGGGTGATGACGTGTGA
Suggested primer 2:AAACATCACACAGTTGCGCC