Insertion junction: CLIP2.071190_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.071190
Chromosome:chromosome 13
Location:983985
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g568300 3'UTR
Cre13.g568350 BLZ18 bZIP transcription factor 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCGCTGCGCATGAGGCTGGCGCCAGGGGTGGCGCAAGTCCCGCGGTACT
Internal bar code:GAAACCGCCAGAATCGGAGATG

Confirmation - LEAP-Seq

LEAP-Seq distance:1560
LEAP-Seq percent confirming:89.6552
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:GCGGATGGGTATGAGTGGAG
Suggested primer 2:ACCTTGATGCAGCGACAAGA