Insertion junction: CLIP2.071190_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.071190
Chromosome:chromosome 13
Location:983987
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g568300 3'UTR
Cre13.g568350 BLZ18 bZIP transcription factor 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTGAGTGTAATACGAGCAATAATATTACAAGGCTCTACCAGACTCCGTA
Internal bar code:GGTACCATTGTCGCTCCTGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:4521
LEAP-Seq percent confirming:95.7747
LEAP-Seq n confirming:68
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:71

Suggested primers for confirmation by PCR

Suggested primer 1:ACCTTGATGCAGCGACAAGA
Suggested primer 2:GCGGATGGGTATGAGTGGAG