Insertion junction: CLIP2.071194_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.071194
Chromosome:chromosome 16
Location:4974191
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g686350 (1 of 1) IPR000738//IPR009068 - WHEP-TRS domain // S15/NS1, RNA-binding 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTGAGGCACGCTGCCGTGACTACACGCCCATGCAAGGCTCTCGTCACTG
Internal bar code:TATAGCTAACTTTATAAAGGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2274
LEAP-Seq percent confirming:95.5556
LEAP-Seq n confirming:43
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:GGCTCGTGCTGATATGACGA
Suggested primer 2:GCAAAGGCAGGTTGGTGAAG