Insertion junction: CLIP2.071200_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.071200
Chromosome:chromosome 3
Location:9033880
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g202673 CSC2 Chlamydomonadale-specific family C protein 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGATGTGTGCGTCTACCTGAATGTGTCCAATTTGATTCTGATGGGGAGA
Internal bar code:ATAAGACTTGGCGTTTCTAGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:3175
LEAP-Seq percent confirming:93.1818
LEAP-Seq n confirming:41
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:44

Suggested primers for confirmation by PCR

Suggested primer 1:AAATGCATGCACACCACACC
Suggested primer 2:GTGTGTTTTCGGTGGGAACG