Insertion junction: CLIP2.071210_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.071210
Chromosome:chromosome 1
Location:701236
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g003950 (1 of 28) PTHR31600:SF2 - TINY MACROCYSTS PROTEIN B-RELATED outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACAAAACCCGCCCCAAAACCGGGCCAACAATGTCTTGCCTCAGACATTA
Internal bar code:TACCTTAACTGTAGGGATGTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1927
LEAP-Seq percent confirming:41.1765
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:30
LEAP-Seq n unique pos:51

Suggested primers for confirmation by PCR

Suggested primer 1:CCGTTGCATTACGCTAGTGC
Suggested primer 2:GGAAGTCACGTGCTGAGTGA