Insertion junction: CLIP2.071210_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.071210
Chromosome:chromosome 1
Location:701240
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g003950 (1 of 28) PTHR31600:SF2 - TINY MACROCYSTS PROTEIN B-RELATED outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCCTTTGGAGAAGCCCCCCAACCGCCATGTGCCCAGACAAAAGACGGCG
Internal bar code:ATAACGAGTTTTCGGGGGGATC

Confirmation - LEAP-Seq

LEAP-Seq distance:1877
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:70
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:70

Suggested primers for confirmation by PCR

Suggested primer 1:GGAAGTCACGTGCTGAGTGA
Suggested primer 2:CCGTTGCATTACGCTAGTGC