Insertion junction: CLIP2.071224_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.071224
Chromosome:chromosome 9
Location:4188532
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g399738 (1 of 239) IPR016024 - Armadillo-type fold 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCACCATCATGTCGAAGCGTGCATATTCATGAGCGTGAGCATGCTGAGA
Internal bar code:AGGTCCCGGGTCCAATTAAGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:2736
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:58
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:58

Suggested primers for confirmation by PCR

Suggested primer 1:CTACCGTTGTACGCCGCTAT
Suggested primer 2:TACTGGCGGTCTTTGGACAC