Insertion junction: CLIP2.071224_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.071224
Chromosome:chromosome 9
Location:4188580
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g399738 (1 of 239) IPR016024 - Armadillo-type fold 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGCTAGTCCACACCGCATGCTGAGCGGCCGGCTTTAGACTACAACGCTC
Internal bar code:TGACAAACCCAACGCCAAGTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1287
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:TACTGGCGGTCTTTGGACAC
Suggested primer 2:CTACCGTTGTACGCCGCTAT