Insertion junction: CLIP2.071228_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.071228
Chromosome:chromosome 1
Location:3355315
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g021750 (1 of 1) PF07818 - HCNGP-like protein (HCNGP) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATATCAAGTTGCAAATGCGACAGTAGGTGGCACTCGCACCGCCGTGGTGA
Internal bar code:TTCGCTTGCGCGGCCGCATTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:750
LEAP-Seq percent confirming:25.0
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:GATAGCCCCGCAGATAACCC
Suggested primer 2:CATGTTATGACTGCGCCGTG