Insertion junction: CLIP2.071228_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.071228
Chromosome:chromosome 1
Location:3355325
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g021750 (1 of 1) PF07818 - HCNGP-like protein (HCNGP) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACTTGATATGCCGAGCCAAATAACTTGTGTTCAAGGGGCCGCTCTGCGG
Internal bar code:TTCGCTTGCGCGGCCGCATTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:2892
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:72
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:72

Suggested primers for confirmation by PCR

Suggested primer 1:CATGTTATGACTGCGCCGTG
Suggested primer 2:GATAGCCCCGCAGATAACCC