Insertion junction: CLIP2.071229_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.071229
Chromosome:chromosome 12
Location:2722922
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g504750 HTA16,HTA43 Histone H2A; (1 of 30) K11251 - histone H2A (H2A) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGAAACACCGAGTTTTTTTGGGGTGCAACTTGGGGTTGCAACAGGGCAC
Internal bar code:CCCTGTGTGTCAACGTCCTGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:234
LEAP-Seq percent confirming:18.1818
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:GAGCGGTTGTTTGACCCAAC
Suggested primer 2:CAAACCCAACACTCAGCAGC