Insertion junction: CLIP2.071230_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.071230
Chromosome:chromosome 1
Location:3043681
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g800062 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGCTTTGCCATGCGGCCGTGGCTTGCAATAGACGCAGTACGCCAAAAAG
Internal bar code:GTGTGCGTTGACAGCCGACACT

Confirmation - LEAP-Seq

LEAP-Seq distance:1855
LEAP-Seq percent confirming:96.6667
LEAP-Seq n confirming:58
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:60

Suggested primers for confirmation by PCR

Suggested primer 1:GGCATTGTGGGAGTGTCAGA
Suggested primer 2:GCTTATTGGAGGCCTGTGGT