Insertion junction: CLIP2.071234_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.071234
Chromosome:chromosome 10
Location:3941367
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g446800 (1 of 3) IPR016087 - Chalcone isomerase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCGGAGGCCTAGTGAAAGGCCCTCCGCCATCTTACCTTGCTATTAATCC
Internal bar code:GGGAACTTAAAAGATCCGATAT

Confirmation - LEAP-Seq

LEAP-Seq distance:3402
LEAP-Seq percent confirming:63.4146
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:GCCGGCATATGAGCTGTTTG
Suggested primer 2:GCAAAACCGCAAAAGCACAC