Insertion junction: CLIP2.071237_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.071237
Chromosome:chromosome 12
Location:165701
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g484400 FKM7 DNA methylase in the FkbM family; (1 of 13) PF05050 - Methyltransferase FkbM domain (Methyltransf_21) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGATTGTGTATGGTCATACAGTTGTGGAAACCGGGGTGTGACAGCAACT
Internal bar code:AATTGCGGGCCGCGGGGAGCCA

Confirmation - LEAP-Seq

LEAP-Seq distance:2199
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:109
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:109

Suggested primers for confirmation by PCR

Suggested primer 1:GCTCTGCGTTGCGTGATTAG
Suggested primer 2:CTGTGGGACATTGGCTGGAT