Insertion junction: CLIP2.071238_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.071238
Chromosome:chromosome 14
Location:1676942
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g618820 CSB57 (1 of 70) PF07282 - Putative transposase DNA-binding domain (OrfB_Zn_ribbon); {"Probable transposon-derived protein of Chlamydomonas-Specific family B 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTCTAACGCAGCGAGGCTTTCCTCGCGCGTGACCGCCACGCCACCGGCT
Internal bar code:GTTTAAGGTAGGGTCCCTCTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1142
LEAP-Seq percent confirming:77.7778
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:CCGCTGCATTGTGTGTTTCA
Suggested primer 2:GCTTGTCCAGCTTTTCCGTG