Insertion junction: CLIP2.071241_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.071241
Chromosome:chromosome 16
Location:886441
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g648100 (1 of 1) K05757 - actin related protein 2/3 complex, subunit 1A/1B (ARPC1A_B) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCTTGCCAATTAGAGTTGTCCGCACAGTTCATCACACTCCTGTTCCGCC
Internal bar code:TTGAGTCTTTTATCCAAAGTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2208
LEAP-Seq percent confirming:65.9091
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:44

Suggested primers for confirmation by PCR

Suggested primer 1:GGTAGCGCTGACCATACCTC
Suggested primer 2:GTGCGGTATTGCGATCACAC