Insertion junction: CLIP2.071251_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.071251
Chromosome:chromosome 12
Location:3669402
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g513550 3'UTR
Cre12.g513600 SGTA,SGTA1 (1 of 1) K12795 - suppressor of G2 allele of SKP1 (SUGT1, SGT1); Small glutamine-rich tetratricopeptide repeat-containing protein alpha 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTATATGACACAGAGTATATGACACAGAGTATATGACACAGAGTTACCA
Internal bar code:CAACATGGACGCATTGAAAAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:3165
LEAP-Seq percent confirming:57.377
LEAP-Seq n confirming:35
LEAP-Seq n nonconfirming:26
LEAP-Seq n unique pos:61

Suggested primers for confirmation by PCR

Suggested primer 1:GAGCAGGACAACGAGAAGCT
Suggested primer 2:GTCACTTCTACCCCCTGCAC