Insertion junction: CLIP2.071256_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.071256
Chromosome:chromosome 5
Location:283387
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g243353 (1 of 14) PF13540 - Regulator of chromosome condensation (RCC1) repeat (RCC1_2) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGACAATACGGGGATTGGGGAGGCGCTGAAATGGAACTCGCCTCAATTTA
Internal bar code:TCGTATGTTGTAAACCTCAGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:2086
LEAP-Seq percent confirming:65.2174
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:GGGAATACGAACCCACACGT
Suggested primer 2:TGTCACTGTCTCTGCTGCTG