Insertion junction: CLIP2.071259_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.071259
Chromosome:chromosome 4
Location:2315978
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre04.g220768 (1 of 781) IPR000104 - Antifreeze protein, type I gene_edge/mRNA_edge/CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATGAGCTCGCAATATAGCAATAGTAGCCAGGGCATCTTGACCGAGGCCG
Internal bar code:GGCGCCCGGTTCTATGCCATGG

Confirmation - LEAP-Seq

LEAP-Seq distance:399
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:AGTGACGGTGGTGTCTGTTC
Suggested primer 2:GTGTGGTGTTTCGACTGTGC