Insertion junction: CLIP2.071261_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.071261
Chromosome:chromosome 14
Location:2427082
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g623550 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCACAGGCATGTGGTGTCTGGTTCGAGCAGCTTCGAGGCGTGCTGTAAT
Internal bar code:CGCGGCTTCCTATTATGGTTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1374
LEAP-Seq percent confirming:97.2222
LEAP-Seq n confirming:35
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:GTCGTGACCTCGTTCCAACT
Suggested primer 2:GCTACTGCTACTGCTAGGGC