Insertion junction: CLIP2.071265_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.071265
Chromosome:chromosome 8
Location:3059070
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre08.g375400 GSM1 (1 of 1) PTHR11850//PTHR11850:SF102 - HOMEOBOX PROTEIN TRANSCRIPTION FACTORS // SUBFAMILY NOT NAMED; Gamete-specific minus 1 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCTGTGGTCCGCGGCACCTTGGACGTGCGCAAGGTGCGTGTGTGCGGGA
Internal bar code:TACCTTTTCGGCTATCAGCAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:40
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:ACTCCCATGACAACGACACC
Suggested primer 2:AGGATGAGCTCACCTTTGCC