Insertion junction: CLIP2.071266_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.071266
Chromosome:chromosome 12
Location:6267015
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g536412 5'UTR
Cre12.g536425 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTTTCAGCGGTTTCGGGTACATGCCGTGAACACGCACCGACCTCGTTCC
Internal bar code:TCGCCGTAAAAATAGAAAGTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:5335
LEAP-Seq percent confirming:67.5
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:ACGGGAGAAGAAAGAAGCGG
Suggested primer 2:CCCTCGGTGAAGGTCATGAC