Insertion junction: CLIP2.071266_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.071266
Chromosome:chromosome 12
Location:6267026
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g536412 5'UTR
Cre12.g536425 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCAAATTCTCCAGAACCAAATAACCAAGGTGTAATACGACGGCGACCCG
Internal bar code:GATAAGGTAAAATGTATTGTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:5038
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:97
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:97

Suggested primers for confirmation by PCR

Suggested primer 1:CCCTCGGTGAAGGTCATGAC
Suggested primer 2:ACGGGAGAAGAAAGAAGCGG