Insertion junction: CLIP2.071276_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.071276
Chromosome:chromosome 1
Location:4340989
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g029450 (1 of 1) K09272 - structure-specific recognition protein 1 (SSRP1) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGATTGCCATGGGGAGCCAAGGGAGGACGTCACGACAACGCACTCAACA
Internal bar code:AGTGGACCCGATAACCTACTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:3063
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:55
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:55

Suggested primers for confirmation by PCR

Suggested primer 1:CGTTTTGTGGTGAGCATGCA
Suggested primer 2:GCTGTAATTGTAGCGGCTGC