Insertion junction: CLIP2.071277_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.071277
Chromosome:chromosome 9
Location:6198337
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g413350 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTACCCAGCTCGCTCGTGTCTCTTCCTTTTCTCTCCAAACTAGCACCGGA
Internal bar code:GTGTTAGTACAAAGTATTCGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:2039
LEAP-Seq percent confirming:86.6667
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:GTGGGGTTGAAGTGAGGAGG
Suggested primer 2:AACCACCGTATTGGACACCC