Insertion junction: CLIP2.071278_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.071278
Chromosome:chromosome 12
Location:1129500
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g491000 (1 of 14) PF04577 - Protein of unknown function (DUF563) (DUF563) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTCAGAAGCTAAGCGAGCCCAGGTAGCGTTGCAGACTTGCTCCCTAACA
Internal bar code:GGCGAGAAGCGTGGAGTGTACG

Confirmation - LEAP-Seq

LEAP-Seq distance:4386
LEAP-Seq percent confirming:87.156
LEAP-Seq n confirming:95
LEAP-Seq n nonconfirming:14
LEAP-Seq n unique pos:109

Suggested primers for confirmation by PCR

Suggested primer 1:TGCTCACTCGTCAGGAACAC
Suggested primer 2:CATTGCGCCTCACAACAACA