Insertion junction: CLIP2.071283_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.071283
Chromosome:chromosome 16
Location:2051921
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g657050 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTCAGGCTTCCCCGCGCCACCTGTGCGACTAAACAGCGAGTCTGCTGGG
Internal bar code:GAATACGGGATTGCACCGGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1428
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:GAAGGCATGAGAAGGCAGGT
Suggested primer 2:GCCTACATAGCGCTGCAAAC