Insertion junction: CLIP2.071286_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.071286
Chromosome:chromosome 16
Location:1058746
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g649400 RRM15,CPLD16 Putative RNA methyl transferase; (1 of 1) PTHR11061:SF12 - RNA BINDING PROTEIN-RELATED outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTATGGGGCTGTGTCGCCTCCCGACCCTGGTCGTCCGTCCGCCACCGACC
Internal bar code:TTACACCTGAAGTAGGGGTGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:493
LEAP-Seq percent confirming:19.3548
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:50
LEAP-Seq n unique pos:62

Suggested primers for confirmation by PCR

Suggested primer 1:CCGACCAAGAGCGCATATCT
Suggested primer 2:CAAACTGAACTTGCCGTGGG