Insertion junction: CLIP2.071288_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.071288
Chromosome:chromosome 9
Location:5192090
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g801067 (1 of 1) K00699 - glucuronosyltransferase (UGT) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTGGAGGCTTAAGGCACTTCGTGCCAAGCTGTACAAATCATCATCACAA
Internal bar code:GAATGAAGTCTCCCTATCTTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1727
LEAP-Seq percent confirming:97.0588
LEAP-Seq n confirming:66
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:68

Suggested primers for confirmation by PCR

Suggested primer 1:CCCCCAAACGCTAGCAACTA
Suggested primer 2:CCCTTGATCGCATGCATGTG