Insertion junction: CLIP2.071291_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.071291
Chromosome:chromosome 13
Location:4038935
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g801568 3'UTR
lncRNA_TCONS_00110370 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATGACTATCCGTTAGTCCGTTACAGCAAAAGCAGTGCATCACTACGACA
Internal bar code:ACATACTCTAAGACAACCCTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:3260
LEAP-Seq percent confirming:94.2857
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:CAACCAGTAGCTCCCCACTG
Suggested primer 2:CAATCGAAGCGGCAATCCAG