Insertion junction: CLIP2.071291_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.071291
Chromosome:chromosome 13
Location:4038937
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g801568 3'UTR
lncRNA_TCONS_00110370 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTAATTTTCCCGCGTCACAATCTTGAGCCTTGAGCCTTGCACCCTCGTG
Internal bar code:CTGGTTGCGCACGCATGGCCCT

Confirmation - LEAP-Seq

LEAP-Seq distance:2455
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:96
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:96

Suggested primers for confirmation by PCR

Suggested primer 1:CAATCGAAGCGGCAATCCAG
Suggested primer 2:CAACCAGTAGCTCCCCACTG