Insertion junction: CLIP2.071293_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.071293
Chromosome:chromosome 17
Location:4269225
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g729800 ALB3B ALBINO3-like translocon protein; (1 of 3) K03217 - YidC/Oxa1 family membrane protein insertase (yidC, spoIIIJ, OXA1) 3'UTR
Cre17.g729850 PF6-IP4,C1a-18,FAP227 Flagellar central pair-Associated Protein 227; (1 of 5) 2.7.1.68 - 1-phosphatidylinositol-4-phosphate 5-kinase / Type I PIP kinase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACAACTGGTGTCCGAGTAGCGCGGGCAGAGCGCATCCGGCCCCTGCCAC
Internal bar code:TTCGCCAGTATCTCTGTTAGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1841
LEAP-Seq percent confirming:98.2143
LEAP-Seq n confirming:55
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:56

Suggested primers for confirmation by PCR

Suggested primer 1:CCATGGTGGCATGTTTGGTG
Suggested primer 2:GGAGGTGGAGGTGGTATCCT