Insertion junction: CLIP2.071299_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.071299
Chromosome:chromosome 9
Location:2750911
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre09.g391370 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTCCAGCCCCGTAGCAGCACCCGCGGGCAGTCGCCGTGCCTCGATGCGG
Internal bar code:GCACACTTTATCACGTAGGTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:458
LEAP-Seq percent confirming:62.5
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:CTGCAGCAAATGTCACGGAG
Suggested primer 2:CCTTGCACTGCATTGGCTTT