Insertion junction: CLIP2.071307_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.071307
Chromosome:chromosome 3
Location:3164132
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g164950 SRS3 Serine/arginine-rich pre-mRNA splicing factor; (1 of 5) IPR000504//IPR012677 - RNA recognition motif domain // Nucleotide-binding alpha-beta plait domain 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGTTCCTTCTATATCCCCGCAAGCAGCAGTCTACTGATAACGTGAGTAA
Internal bar code:CACCCGAGCCACCTAGTTGCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2088
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:76
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:76

Suggested primers for confirmation by PCR

Suggested primer 1:CATAGTCCAGTGCTAGCCCG
Suggested primer 2:AGCCTGAGTGGTCGTCAATG