Insertion junction: CLIP2.071309_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.071309
Chromosome:chromosome 1
Location:5693705
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g800099 (1 of 1) IPR002048//IPR010308 - EF-hand domain // TRP-like family 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCCGGAAGCTGTAGTACACACGGTGCCCTTGCACACGCGGCAGGCGGTG
Internal bar code:TCCAGTAAATAGCTTATTTTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:4866
LEAP-Seq percent confirming:78.0822
LEAP-Seq n confirming:57
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:73

Suggested primers for confirmation by PCR

Suggested primer 1:GCGACCTCAATCTGGGGAAA
Suggested primer 2:CGAGCGGACCTGTGACTATC